MetaCyc is a curated database of experimentally elucidated metabolic pathways from all domains of life. MetaCyc contains 2526 pathways from 2844 different organisms. MetaCyc contains pathways involved in both primary and secondary metabolism, as well as associated metabolites, reactions, enzymes, and genes. The goal of MetaCyc is to catalog the universe of metabolism by storing a representative sample of each experimentally elucidated pathway.
Local identifiers in MetaCyc Reaction should match this
Compact URIs (CURIEs) constructed from MetaCyc Reaction should match
this regular expression:
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for
1 unique external prefixes.
|Registry Name||Registry Metaprefix||External Prefix||Curate|
|Biolink Model Registry||
Providers are various services that resolve CURIEs to URLs. The example CURIE
is used to demonstrate the provides available for
metacyc.reaction. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.