Registry Multiplexed Assays of Variant Effect Database

Some IDs may represent experiment sets, e.g. https://www.mavedb.org/#/experiment-sets/urn:mavedb:00000011 Others represent genomic regions (specifically deep mutational scans thereof) e.g. https://www.mavedb.org/#/experiment-sets/urn:mavedb:00000011-a

Comment

This is an interesting one as the full IDs as they appear on the page are of the form urn:mavedb:00000011-a suggesting this is the preferred URI expansion for identification purposes. However, mavedb hasn't been registered with IANA https://www.iana.org/assignments/urn-namespaces/urn-namespaces.xhtml

Prefix
mavedb
Links
Homepage Repository Request Discussion
Contact
Alan Rubin   0000-0003-1474-605X   afrubin
Pattern for Local Unique Identifiers

Local identifiers in Multiplexed Assays of Variant Effect Database should match this regular expression:
^\S+$

Example Local Unique Identifiers
00000011-a   Resolve
00000011   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Multiplexed Assays of Variant Effect Database should match this regular expression:
^mavedb:\S+$

Example CURIEs
mavedb:00000011-a
mavedb:00000011
Publications
2019 MaveDB: an open-source platform to distribute and interpret data from multiplexed assays of variant effect
Contributors
Reviewer
Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE mavedb:00000011-a is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Multiplexed Assays of Variant Effect Database mavedb https://www.mavedb.org/#/experiments/urn:mavedb:00000011-a
Bioregistry bioregistry https://bioregistry.io/mavedb:00000011-a