MassBank is a federated database of reference spectra from different instruments, including high-resolution mass spectra of small metabolites (<3000 Da).

Prefix
massbank
Keywords
chemistry life science physics
Links
Homepage Repository
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in MassBank accession ID should match this regular expression:
^MSBNK-[0-9a-zA-Z_]+-[A-Z0-9_]+$

Example Local Unique Identifier
MSBNK-IPB_Halle-PB000166   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MassBank accession ID should match this regular expression:
^massbank:MSBNK-[0-9a-zA-Z_]+-[A-Z0-9_]+$

Example CURIE
massbank:MSBNK-IPB_Halle-PB000166
Publications
2010 MassBank: a public repository for sharing mass spectral data for life sciences.
Metaregistry MassBank accession ID

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for massbank with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext MASSBANK
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.dk451a
Identifiers.org Identifiers.org logo miriam massbank
Name-to-Thing Name-to-Thing logo n2t massbank
Wikidata Property Wikidata Property logo wikidata P6689
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE massbank:MSBNK-IPB_Halle-PB000166 is used to demonstrate the provides available for massbank. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
MassBank accession ID massbank https://massbank.jp/RecordDisplay?id=MSBNK-IPB_Halle-PB000166
Bioregistry bioregistry https://bioregistry.io/massbank:MSBNK-IPB_Halle-PB000166
Identifiers.org miriam https://identifiers.org/massbank:MSBNK-IPB_Halle-PB000166
Name-to-Thing n2t https://n2t.net/massbank:MSBNK-IPB_Halle-PB000166
None massbankeu https://massbank.eu/MassBank/RecordDisplay?id=MSBNK-IPB_Halle-PB000166
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
massbankeu MassBank in Europe https://massbank.eu/MassBank/RecordDisplay?id=MSBNK-IPB_Halle-PB000166