MassBank is a federated database of reference spectra from different instruments, including high-resolution mass spectra of small metabolites (<3000 Da).

chemistry life science physics
Homepage Repository
Tobias Schulze   0000-0002-9744-8914   tsufz
Pattern for Local Unique Identifiers

Local identifiers in MassBank should match this regular expression:

Example Local Unique Identifier
MSBNK-IPB_Halle-PB000166   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MassBank should match this regular expression:

Example CURIE
2010 MassBank: a public repository for sharing mass spectral data for life sciences
Metaregistry MassBank

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext MASSBANK
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.dk451a
Integbio Integbio logo integbio nbdc00298 logo miriam massbank
N2T Name-to-Thing logo n2t massbank
Wikidata Wikidata Property logo wikidata P6689

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier MSBNK-IPB_Halle-PB000166 is used to demonstrate the providers available for MassBank. A guide for curating additional providers can be found here.

Name Metaprefix URI
MassBank massbank
Bioregistry bioregistry miriam
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from or Prefix Commons, and need extra curation.

Code Name URL
massbankeu MassBank in Europe