A structured controlled vocabulary of the adult anatomy of the mouse (Mus)

Prefix

ma

Preferred Prefix

MA

Keywords

anatomy mouse obo ontology

Version

2017-02-07

License

CC-BY-4.0

Links

Homepage Repository OBO OWL

Contact

Terry Hayamizu   0000-0002-0956-8634   tfhayamizu

Pattern for Local Unique Identifiers

Local identifiers in Mouse adult gross anatomy should match this regular expression:
^\d+$

Example Local Unique Identifier

0002502   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Mouse adult gross anatomy should match this regular expression:
^ma:\d+$

Example CURIE

ma:0002502

MIRIAM Namespace Embedded in LUI

The legacy MIRIAM standard for generating CURIEs with this resource includes the namespaceEmbeddedInLUI as true. The actual part that gets prefixed before the local unique identifier regex, otherwise known as the banana, is MA:. Therefore, you might see local unique identifiers written out as CURIEs.

Publications

2005 The Adult Mouse Anatomical Dictionary: a tool for annotating and integrating data.

The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for ma with 2 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE ma:0002502 is used to demonstrate the provides available for ma. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.