Registry LinkML
Linkml is a flexible modeling language that allows you to author schemas in yaml that describe the structure of your data. additionally, it is a framework for working with and validating data in a variety of formats (json, rdf, tsv), with generators for compiling linkml schemas to other frameworks.
- Comment
Closes #508
- Prefix
linkml- Keywords
- data integration ontology and terminology
- Links
- Homepage Repository Request Discussion @linkml_data
- Contact
- Chris Mungall 0000-0002-6601-2165 cmungall
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- SchemaDefinition Resolve
- Pattern for CURIES
- Could not construct CURIE pattern
- Example CURIE
- linkml:SchemaDefinition
- Publications
- 2022 linkml/linkml-model: v1.3.1
- Contributors
-
- submitter Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry LinkML
The metaregistry provides mappings between the Bioregistry and other registries. There are
2 mappings to external registries for linkml with
2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| Biolink Model Registry | biolink |
linkml
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.cb7086
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
linkml:SchemaDefinition
is used to demonstrate the provides available for
linkml. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| LinkML | linkml |
https://w3id.org/linkml/SchemaDefinition |
| Bioregistry | bioregistry |
https://bioregistry.io/linkml:SchemaDefinition |