The Library of Network-Based Cellular Signatures (LINCS) Program aims to create a network-based understanding of biology by cataloging changes in gene expression and other cellular processes that occur when cells are exposed to a variety of perturbing agents. The LINCS small molecule collection is used as perturbagens in LINCS experiments. The small molecule metadata includes substance-specific batch information provided by each LINCS Data and Signature Generation Center (DSGC).
lincs.smallmolecule
Local identifiers in LINCS Small Molecule should match this
regular expression:
^LSM-\d+$
Compact URIs (CURIEs) constructed from LINCS Small Molecule should match
this regular expression:
^lincs\.smallmolecule:LSM-\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for lincs.smallmolecule
with
1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
LINCS.SMALLMOLECULE
|
|
Identifiers.org
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miriam |
lincs.smallmolecule
|
|
N2T
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n2t |
lincs.smallmolecule
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
lincs.smallmolecule:LSM-6306
is used to demonstrate the provides available for
lincs.smallmolecule
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
LINCS Small Molecule | lincs.smallmolecule |
http://lincsportal.ccs.miami.edu/SmallMolecules/#/view/LSM-6306 |
Bioregistry | bioregistry |
https://bioregistry.io/lincs.smallmolecule:LSM-6306 |
Identifiers.org | miriam |
https://identifiers.org/lincs.smallmolecule:LSM-6306 |
Name-to-Thing | n2t |
https://n2t.net/lincs.smallmolecule:LSM-6306 |