The Library of Network-Based Cellular Signatures (LINCS) Program aims to create a network-based understanding of biology by cataloging changes in gene expression and other cellular processes that occur when cells are exposed to a variety of perturbing agents. The LINCS small molecule collection is used as perturbagens in LINCS experiments. The small molecule metadata includes substance-specific batch information provided by each LINCS Data and Signature Generation Center (DSGC).

Alternative Prefixes
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in LINCS Small Molecule should match this regular expression:

Example Local Unique Identifier
LSM-6306   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from LINCS Small Molecule should match this regular expression:

Example CURIE

A summary of the relations in the Bioregistry schema can be found here.

In Collection
ChEBI Data Sources
Metaregistry LINCS Small Molecule

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext LINCS.SMALLMOLECULE logo miriam lincs.smallmolecule
N2T Name-to-Thing logo n2t lincs.smallmolecule

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier LSM-6306 is used to demonstrate the providers available for LINCS Small Molecule. A guide for curating additional providers can be found here.

Name Metaprefix URI
LINCS Small Molecule lincs.smallmolecule
Bioregistry bioregistry miriam
Name-to-Thing n2t