The Library of Network-Based Cellular Signatures (LINCS) Program aims to create a network-based understanding of biology by cataloging changes in gene expression and other cellular processes that occur when cells are exposed to a variety of perturbing agents. The LINCS small molecule collection is used as perturbagens in LINCS experiments. The small molecule metadata includes substance-specific batch information provided by each LINCS Data and Signature Generation Center (DSGC).

Prefix
lincs.smallmolecule
Alternative Prefixes
lincs
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in LINCS Small Molecule should match this regular expression:
^LSM-\d+$

Example Local Unique Identifier
LSM-6306   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from LINCS Small Molecule should match this regular expression:
^lincs.smallmolecule:LSM-\d+$

Example CURIE
lincs.smallmolecule:LSM-6306
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for lincs.smallmolecule.

Registry Name Metaprefix External Prefix
Identifiers.org miriam lincs.smallmolecule
Name-to-Thing n2t lincs.smallmolecule
Prefix Commons prefixcommons LINCS.SMALLMOLECULE
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE lincs.smallmolecule:LSM-6306 is used to demonstrate the provides available for lincs.smallmolecule. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
LINCS Small Molecule lincs.smallmolecule http://lincsportal.ccs.miami.edu/SmallMolecules/#/view/LSM-6306
Bioregistry bioregistry https://bioregistry.io/lincs.smallmolecule:LSM-6306
Identifiers.org miriam https://identifiers.org/lincs.smallmolecule:LSM-6306
Name-to-Thing n2t https://n2t.net/lincs.smallmolecule:LSM-6306