The Library of Network-Based Cellular Signatures (LINCS) Program aims to create a network-based understanding of biology by cataloging changes in gene expression and other cellular processes that occur when cells are exposed to a variety of perturbing agents. The LINCS cell model system can have the following cell categories: cell lines, primary cells, induced pluripotent stem cells, differentiated cells, and embryonic stem cells. The metadata contains information provided by each LINCS Data and Signature Generation Center (DSGC) and the association with a tissue or organ from which the cells were derived, in many cases are also associated to a disease.

Prefix

lincs.cell

Alternative Prefixes

LINCS_LDP

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in LINCS Cell should match this regular expression:
^(LCL|LDC|ES|LSC|LPC)-\d+$

Example Local Unique Identifier

LCL-2085   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from LINCS Cell should match this regular expression:
^lincs\.cell:(LCL|LDC|ES|LSC|LPC)-\d+$

Example CURIE

lincs.cell:LCL-2085

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for lincs.cell with 2 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE lincs.cell:LCL-2085 is used to demonstrate the provides available for lincs.cell. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.