Registry Database of Spatially Interacting Motifs in Proteins Deprecated

The interacting motif database or iMOTdb , lists interacting motifs thatare identified for all structural entries in the PDB. The conserved patterns or finger prints are identified for individual structural entries and also grouped together for reporting the common motifs shared among all superfamily members.


This resource doesn't exist on the web anymore

interaction protein
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
53784   Resolve
Example CURIE
Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt
Metaregistry Database of Spatially Interacting Motifs in Proteins

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Pathguide Pathguide logo pathguide 207
Prefix Commons Prefix Commons logo prefixcommons imotdb

Providers are various services that resolve CURIEs to URLs. The example CURIE imotdb:53784 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Database of Spatially Interacting Motifs in Proteins imotdb
Bioregistry bioregistry
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF