Registry The COVID-19 Infectious Disease Ontology

The COVID-19 Infectious Disease Ontology (IDO-COVID-19) is an extension of the Infectious Disease Ontology (IDO) and the Virus Infectious Disease Ontology (VIDO). IDO-COVID-19 follows OBO Foundry guidelines, employs the Basic Formal Ontology as its starting point, and covers epidemiology, classification, pathogenesis, and treatment of terms used to represent infection by the SARS-CoV-2 virus strain, and the associated COVID-19 disease.

Prefix
idocovid19
Version
2020-07-21
Links
Homepage Repository OWL
Contact
John Beverly   0000-0002-1118-1738   johnbeve
Pattern for Local Unique Identifiers

Local identifiers in The COVID-19 Infectious Disease Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0001191   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from The COVID-19 Infectious Disease Ontology should match this regular expression:
^idocovid19:\d{7}$

Example CURIE
idocovid19:0001191
Metaregistry The COVID-19 Infectious Disease Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for idocovid19 with 2 unique external prefixes.

Registry Name Metaprefix External Prefix
AberOWL aberowl IDO-COVID-19
BioPortal Prefixes bioportal IDO-COVID-19
Ontology Lookup Service Ontology Lookup Service logo ols idocovid19
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE idocovid19:0001191 is used to demonstrate the provides available for idocovid19. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
The COVID-19 Infectious Disease Ontology idocovid19 http://purl.obolibrary.org/obo/COVIDO_0001191
Bioregistry bioregistry https://bioregistry.io/idocovid19:0001191