Registry Integrative and Conjugative Element Ontology

A biological ontology to standardize and integrate Integrative and Conjugative Element (ICE) information and to support computer-assisted reasoning.

Prefix
iceo
Preferred Prefix
ICEO
Version
2.1
Links
Homepage Repository OWL
Contact
Meng LIU   0000-0003-3781-6962   Lemon-Liu
Pattern for Local Unique Identifiers

Local identifiers in Integrative and Conjugative Element Ontology should match this regular expression:
^\d{7}(_\d)?$

Example Local Unique Identifiers
0000712_1   Resolve
0000712   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Integrative and Conjugative Element Ontology should match this regular expression:
^ICEO:\d{7}(_\d)?$

Example CURIEs
ICEO:0000712_1
ICEO:0000712
Metaregistry Integrative and Conjugative Element Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for iceo.

Registry Name Metaprefix External Prefix
BioPortal Prefixes bioportal ICEO
OBO Foundry OBO Foundry logo obofoundry ICEO
Ontology Lookup Service Ontology Lookup Service logo ols iceo
OntoBee ontobee ICEO
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE iceo:0000712_1 is used to demonstrate the provides available for iceo. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Bioregistry bioregistry https://bioregistry.io/iceo:0000712_1
OBO Foundry obofoundry http://purl.obolibrary.org/obo/ICEO_0000712_1
Ontology Lookup Service ols https://www.ebi.ac.uk/ols/ontologies/iceo/terms?iri=http://purl.obolibrary.org/obo/ICEO_0000712_1
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/ICEO/?p=classes&conceptid=http://purl.obolibrary.org/obo/ICEO_0000712_1