ICEberg (Integrative and conjugative elements) is a database of integrative and conjugative elements (ICEs) found in bacteria. ICEs are conjugative self-transmissible elements that can integrate into and excise from a host chromosome, and can carry likely virulence determinants, antibiotic-resistant factors and/or genes coding for other beneficial traits. It contains details of ICEs found in representatives bacterial species, and which are organised as families. This collection references ICE families.

Prefix

iceberg.family

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in ICEberg family should match this regular expression:
^\d+$

Example Local Unique Identifier

1   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from ICEberg family should match this regular expression:
^iceberg\.family:\d+$

Example CURIE

iceberg.family:1

Publications

• 2019 ICEberg 2.0: an updated database of bacterial integrative and conjugative elements
• 2011 ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria

A summary of the relations in the Bioregistry schema can be found here.

Part Of (bfo:0000050 )

iceberg (not directly registered)

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE iceberg.family:1 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.