The Human Phenotype Ontology (HPO) aims to provide a standardized vocabulary of phenotypic abnormalities encountered in human disease. Each term in the HPO describes a phenotypic abnormality, such as atrial septal defect. The HPO is currently being developed using the medical literature, Orphanet, DECIPHER, and OMIM.

Prefix
hp
Preferred Prefix
HP
Alternative Prefixes
hpo
Version
2022-06-11
License
hpo
Links
Homepage Repository OBO OWL OBO JSON @hp_ontology
Contact
Sebastian Koehler   0000-0002-5316-1399   drseb
Pattern for Local Unique Identifiers

Local identifiers in Human Phenotype Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0011140   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Human Phenotype Ontology should match this regular expression:
^hp:\d{7}$

Example CURIE
hp:0011140
MIRIAM Namespace Embedded in LUI
The legacy MIRIAM standard for generating CURIEs with this resource includes the namespaceEmbeddedInLUI as true. The actual part that gets prefixed before the local unique identifier regex, otherwise known as the banana, is HP:. Therefore, you might see local unique identifiers written out as CURIEs.
Publications
Ontology
Appears In (2)
CHIRO SCDO
Metaregistry Human Phenotype Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for hp with 6 unique external prefixes.

Registry Name Metaprefix External Prefix
AberOWL aberowl HP_O
BioContext biocontext HPO
BioPortal Prefixes bioportal HP_O
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.kbtt7f
HL7 External Code Systems hl7 2.16.840.1.113883.6.339
Identifiers.org Identifiers.org logo miriam hp
Name-to-Thing Name-to-Thing logo n2t hp
OBO Foundry OBO Foundry logo obofoundry hp
Ontology Lookup Service Ontology Lookup Service logo ols hp
OntoBee ontobee HP
Wikidata Property Wikidata Property logo wikidata P3841
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE hp:0011140 is used to demonstrate the provides available for hp. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Human Phenotype Ontology hp https://hpo.jax.org/app/browse/term/HP:0011140
Bioregistry bioregistry https://bioregistry.io/hp:0011140
Identifiers.org miriam https://identifiers.org/HP:0011140
OBO Foundry obofoundry http://purl.obolibrary.org/obo/HP_0011140
Ontology Lookup Service ols https://www.ebi.ac.uk/ols/ontologies/hp/terms?iri=http://purl.obolibrary.org/obo/HP_0011140
Name-to-Thing n2t https://n2t.net/hp:0011140
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/HP_O/?p=classes&conceptid=http://purl.obolibrary.org/obo/HP_0011140