Logo for Human Phenotype Ontology The Human Phenotype Ontology (HPO) aims to provide a standardized vocabulary of phenotypic abnormalities encountered in human disease. Each term in the HPO describes a phenotypic abnormality, such as atrial septal defect. The HPO is currently being developed using the medical literature, Orphanet, DECIPHER, and OMIM.

Prefix
hp
Preferred Prefix
HP
Alternative Prefixes
hpo
Keywords
biomedical science disease genetics obo ontology phenomics phenotype preclinical studies
Version
2024-01-16
License
hpo
Links
Homepage Repository OBO OWL OBO JSON @hpo@masto.ai @hp_ontology
Contact
Sebastian Koehler   0000-0002-5316-1399   drseb
Pattern for Local Unique Identifiers

Local identifiers in Human Phenotype Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0011140   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Human Phenotype Ontology should match this regular expression:
^HP:\d{7}$

Example CURIE
HP:0011140
MIRIAM Namespace Embedded in LUI
The legacy MIRIAM standard for generating CURIEs with this resource annotates the namespaceEmbeddedInLUI as true. This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known as a banana) and therefore look like a CURIE. For Human Phenotype Ontology, the banana looks like HP:. Therefore, you may see local unique identifiers for this resource that look like HP:0011140 (instead of the canonical form 0011140) and CURIEs for this resource that look like HP:HP:0011140 (instead of the canonical form HP:0011140). The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Appears In (3) (bioregistry.schema:0000018 )
CHIRO MAXO SCDO
In Collection
ASKEM Epidemiology Prefixes
Metaregistry Human Phenotype Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 13 mappings to external registries for this resource with 8 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl HP_O
BARTOC Basic Register of Thesauri, Ontologies & Classifications logo bartoc 1937
BioContext biocontext HPO
BioPortal BioPortal Prefixes logo bioportal HP_O
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.kbtt7f
HL7 HL7 External Code Systems logo hl7 2.16.840.1.113883.6.339
Integbio Integbio logo integbio nbdc02559
Identifiers.org Identifiers.org logo miriam hp
N2T Name-to-Thing logo n2t hp
OBO Foundry OBO Foundry logo obofoundry hp
OLS Ontology Lookup Service logo ols hp
OntoBee OntoBee logo ontobee HP
Wikidata Wikidata Property logo wikidata P3841
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/HP_$1