The Human Oral Microbiome Database (HOMD) provides a site-specific comprehensive database for the more than 600 prokaryote species that are present in the human oral cavity. It contains genomic information based on a curated 16S rRNA gene-based provisional naming scheme, and taxonomic information. This datatype contains taxonomic information.

Prefix

homd.taxon

Keywords

microbial taxonomy

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in Human Oral Microbiome Database should match this regular expression:
^\d+$

Example Local Unique Identifier

811   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Human Oral Microbiome Database should match this regular expression:
^homd\.taxon:\d+$

Example CURIE

homd.taxon:811

Publications

2010 The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE homd.taxon:811 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Additional providers curated in the Bioregistry are listed here.