The Human Oral Microbiome Database (HOMD) provides a site-specific comprehensive database for the more than 600 prokaryote species that are present in the human oral cavity. It contains genomic information based on a curated 16S rRNA gene-based provisional naming scheme, and taxonomic information. This datatype contains taxonomic information.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in HOMD Taxonomy should match this regular expression:

Example Local Unique Identifier
811   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from HOMD Taxonomy should match this regular expression:

Example CURIE

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for homd.taxon.

Registry Name Metaprefix External Prefix miriam homd.taxon
Name-to-Thing n2t homd.taxon
Prefix Commons prefixcommons HOMD.TAXON

Providers are various services that resolve CURIEs to URLs. The example CURIE homd.taxon:811 is used to demonstrate the provides available for homd.taxon. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
HOMD Taxonomy homd.taxon
Bioregistry bioregistry miriam
Name-to-Thing n2t