Human ancestry ontology for the NHGRI GWAS Catalog

Prefix
hancestro
Preferred Prefix
HANCESTRO
Keywords
demographics genome-wide association study human genetics obo ontology population genetics
Version
2023-10-13
License
CC-BY-4.0
Links
Homepage Repository OWL
Contact
Danielle Welter   0000-0003-1058-2668   daniwelter
Identifier Space Owner
European Bioinformatics Institute
Pattern for Local Unique Identifiers

Local identifiers in Human Ancestry Ontology should match this regular expression:
^\d{4}$

Example Local Unique Identifier
0290   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Human Ancestry Ontology should match this regular expression:
^HANCESTRO:\d{4}$

Example CURIE
HANCESTRO:0290
Publications
2018 A standardized framework for representation of ancestry data in genomics studies, with application to the NHGRI-EBI GWAS Catalog
Metaregistry Human Ancestry Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl HANCESTRO
Biolink Biolink Model Registry logo biolink HANCESTRO
BioPortal BioPortal Prefixes logo bioportal HANCESTRO
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.rja8qp
OBO Foundry OBO Foundry logo obofoundry hancestro
OLS Ontology Lookup Service logo ols hancestro
OntoBee OntoBee logo ontobee HANCESTRO
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/HANCESTRO_$1

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE HANCESTRO:0290 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Human Ancestry Ontology hancestro http://purl.obolibrary.org/obo/HANCESTRO_0290
Human Ancestry Ontology (RDF) rdf http://purl.obolibrary.org/obo/HANCESTRO_0290
Bioregistry bioregistry https://bioregistry.io/hancestro:0290
OBO Foundry obofoundry http://purl.obolibrary.org/obo/HANCESTRO_0290
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/hancestro/terms?iri=http://purl.obolibrary.org/obo/HANCESTRO_0290
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/HANCESTRO/?p=classes&conceptid=http://purl.obolibrary.org/obo/HANCESTRO_0290
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
legacy Legacy http://www.ebi.ac.uk/ancestro/ancestro_0290