The Gene Expression Atlas (GXA) is a semantically enriched database of meta-analysis based summary statistics over a curated subset of ArrayExpress Archive, servicing queries for condition-specific gene expression patterns as well as broader exploratory searches for biologically interesting genes/samples. This collection references genes.

Prefix
gxa.gene
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in GXA Gene should match this regular expression:
^\w+$

Example Local Unique Identifier
AT4G01080   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from GXA Gene should match this regular expression:
^gxa.gene:\w+$

Example CURIE
gxa.gene:AT4G01080
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for gxa.gene.

Registry Name Metaprefix External Prefix
Identifiers.org miriam gxa.gene
Name-to-Thing n2t gxa.gene
Prefix Commons prefixcommons GXA.GENE
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE gxa.gene:AT4G01080 is used to demonstrate the provides available for gxa.gene. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
GXA Gene gxa.gene https://www.ebi.ac.uk/gxa/genes/AT4G01080
Bioregistry bioregistry https://bioregistry.io/gxa.gene:AT4G01080
Identifiers.org miriam https://identifiers.org/gxa.gene:AT4G01080
Name-to-Thing n2t https://n2t.net/gxa.gene:AT4G01080