The Gene Expression Atlas (GXA) is a semantically enriched database of meta-analysis based summary statistics over a curated subset of ArrayExpress Archive, servicing queries for condition-specific gene expression patterns as well as broader exploratory searches for biologically interesting genes/samples. This collection references experiments.

Prefix
gxa.expt
Links
Homepage
Contact
Missing Contact
Identifier Space Owner
European Bioinformatics Institute
Pattern for Local Unique Identifiers

Local identifiers in GXA Expt should match this regular expression:
^[AEP]-\w{4}-\d+$

Example Local Unique Identifier
E-MTAB-2037   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from GXA Expt should match this regular expression:
^gxa\.expt:[AEP]-\w{4}-\d+$

Example CURIE
gxa.expt:E-MTAB-2037
Metaregistry GXA Expt

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext GXA.EXPT
Identifiers.org Identifiers.org logo miriam gxa.expt
N2T Name-to-Thing logo n2t gxa.expt
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE gxa.expt:E-MTAB-2037 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
GXA Expt gxa.expt https://www.ebi.ac.uk/gxa/experiments/E-MTAB-2037
Bioregistry bioregistry https://bioregistry.io/gxa.expt:E-MTAB-2037
Identifiers.org miriam https://identifiers.org/gxa.expt:E-MTAB-2037
Name-to-Thing n2t https://n2t.net/gxa.expt:E-MTAB-2037
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
omicsdi GXA Expt through OmicsDI https://www.omicsdi.org/dataset/atlas-experiments/E-MTAB-2037