Registry Gramene Taxonomy
Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic and expressed sequence tag sequences, genetic maps, map relations, quantitative trait loci (QTL), and publications, with a curated database of mutants (genes and alleles), molecular markers, and proteins. This datatype refers to taxonomic information in Gramene.
- Prefix
gramene.taxonomy- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in Gramene Taxonomy should match this regular expression:
^GR\_tax\:\d+$ - Example Local Unique Identifier
- GR_tax:013681 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Gramene Taxonomy should match this regular expression:
^gramene\.taxonomy:GR\_tax\:\d+$ - Example CURIE
- gramene.taxonomy:GR_tax:013681
Metaregistry Gramene Taxonomy
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for gramene.taxonomy.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
| BioContext | biocontext |
GRAMENE.TAXONOMY
|
Identifiers.org
|
miriam |
gramene.taxonomy
|
Name-to-Thing
|
n2t |
gramene.taxonomy
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
gramene.taxonomy:GR_tax:013681 is used to demonstrate the provides available for
gramene.taxonomy. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| Gramene Taxonomy | gramene.taxonomy |
http://www.gramene.org/db/ontology/search?id=GR_tax:013681 |
| Bioregistry | bioregistry |
https://bioregistry.io/gramene.taxonomy:GR_tax:013681 |
| Identifiers.org | miriam |
https://identifiers.org/gramene.taxonomy:GR_tax:013681 |
| Name-to-Thing | n2t |
https://n2t.net/gramene.taxonomy:GR_tax:013681 |