Registry Gramene Growth Stage Ontology

Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic and expressed sequence tag sequences, genetic maps, map relations, quantitative trait loci (QTL), and publications, with a curated database of mutants (genes and alleles), molecular markers, and proteins. This collection refers to growth stage ontology information in Gramene.

Preferred Prefix
Alternative Prefixes
gro-cpga cpga
Plant Ontology Administrators
Pattern for Local Unique Identifiers

Local identifiers in Gramene Growth Stage Ontology should match this regular expression:

Example Local Unique Identifier
0007133   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Gramene Growth Stage Ontology should match this regular expression:

Example CURIE
MIRIAM Namespace Embedded in LUI
The legacy MIRIAM standard for generating CURIEs with this resource includes the namespaceEmbeddedInLUI as true. The actual part that gets prefixed before the local unique identifier regex, otherwise known as the banana, is GRO:. Therefore, you might see local unique identifiers written out as CURIEs.
Metaregistry Gramene Growth Stage Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for gramene.growthstage with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext GRAMENE.GROWTHSTAGE
BioPortal Prefixes bioportal GRO-CPGA logo miriam gramene.growthstage
Name-to-Thing Name-to-Thing logo n2t gramene.growthstage
OBO Foundry OBO Foundry logo obofoundry gro
Prefix Commons prefixcommons gramene.po

Providers are various services that resolve CURIEs to URLs. The example CURIE gramene.growthstage:0007133 is used to demonstrate the provides available for gramene.growthstage. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Gramene Growth Stage Ontology gramene.growthstage
Bioregistry bioregistry miriam
OBO Foundry obofoundry
Name-to-Thing n2t
BioPortal Prefixes bioportal