Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic and expressed sequence tag sequences, genetic maps, map relations, quantitative trait loci (QTL), and publications, with a curated database of mutants (genes and alleles), molecular markers, and proteins. This datatype refers to genes in Gramene.
- Prefix
gramene.gene- Alternative Prefixes
- GR_GENE
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in Gramene Gene should match this regular expression:
^GR\:\d+$ - Example Local Unique Identifier
- GR:0080039 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Gramene Gene should match this regular expression:
^gramene\.gene:GR\:\d+$ - Example CURIE
- gramene.gene:GR:0080039
Metaregistry Gramene Gene
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
GRAMENE.GENE
|
|
GO
|
go |
GR_GENE
|
|
Identifiers.org
|
miriam |
gramene.gene
|
|
N2T
|
n2t |
gramene.gene
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier GR:0080039 is used to demonstrate the providers
available for Gramene Gene. A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| Gramene Gene | gramene.gene |
http://www.gramene.org/db/genes/search_gene?acc=GR:0080039 |
| Bioregistry | bioregistry |
https://bioregistry.io/gramene.gene:GR:0080039 |
| Identifiers.org | miriam |
https://identifiers.org/gramene.gene:GR:0080039 |
| Name-to-Thing | n2t |
https://n2t.net/gramene.gene:GR:0080039 |