Registry GO Chemicals

Represent chemical entities having particular CHEBI roles

Prefix

goche

Preferred Prefix

GOCHE

Alternative Prefixes

go.chemicals go.chemical go.chebi

Keywords

ontology

Links

Homepage Repository OWL

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in GO Chemicals should match this regular expression:
^\d+$

Example Local Unique Identifier

25512 Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from GO Chemicals should match this regular expression:
^goche:\d+$

Example CURIE

goche:25512

References

Contributors

submitter Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE goche:25512 is used to demonstrate the provides available for goche. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
GO Chemicals	`goche`	https://biopragmatics.github.io/providers/goche/25512
Bioregistry	`bioregistry`	https://bioregistry.io/goche:25512

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("go.chemicals")
'goche'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("goche")
{'go.chemicals', 'go.chemical', 'go.chebi'}

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("goche")
'https://github.com/geneontology/go-ontology'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("goche")
'https://github.com/geneontology/go-ontology'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("goche")
'https://raw.githubusercontent.com/geneontology/go-ontology/master/src/ontology/imports/chebi_roles.owl'