Genome properties is an annotation system whereby functional attributes can be assigned to a genome, based on the presence of a defined set of protein signatures within that genome.

classification genome
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Genome Properties should match this regular expression:

Example Local Unique Identifier
GenProp0699   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Genome Properties should match this regular expression:

Example CURIE
Metaregistry Genome Properties

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for genprop with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext GENPROP logo miriam genprop
Name-to-Thing Name-to-Thing logo n2t genprop
Prefix Commons prefixcommons jcvi.genprop

Providers are various services that resolve CURIEs to URLs. The example CURIE genprop:GenProp0699 is used to demonstrate the provides available for genprop. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Genome Properties genprop
Bioregistry bioregistry miriam
Name-to-Thing n2t