Registry Gene Expression Analysis Resource

The gEAR portal is a website for visualization and analysis of multi-omic data both in public and private domains.

Prefix

gear

License

AGPL-3.0-only

Links

Homepage Repository Request Discussion

Contact

Joshua Orvis 0000-0002-5705-5710 jorvis

Pattern for Local Unique Identifiers

Local identifiers in Gene Expression Analysis Resource should match this regular expression:
^[dp]\.[a-z0-9]{8}$

Example Local Unique Identifiers

d.a59037e8 Resolve
p.bfd178f5 Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Gene Expression Analysis Resource should match this regular expression:
^gear:[dp]\.[a-z0-9]{8}$

Example CURIEs

gear:d.a59037e8
gear:p.bfd178f5

Contributors

submitter Joshua Orvis 0000-0002-5705-5710 jorvis

Reviewer

Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE gear:d.a59037e8 is used to demonstrate the provides available for gear. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
Gene Expression Analysis Resource	`gear`	https://umgear.org/p?id=d.a59037e8
Bioregistry	`bioregistry`	https://bioregistry.io/gear:d.a59037e8

Get the license:

>>> import bioregistry as br
>>> br.get_license("gear")
'AGPL-3.0-only'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("gear")
'https://umgear.org'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("gear")
'https://github.com/IGS/gEAR'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("gear")
'Joshua Orvis'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("gear")
'jorvis@gmail.com'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("gear")
'jorvis'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("gear")
'0000-0002-5705-5710'