Registry Genomic Data Commons Data Portal

The GDC Data Portal is a robust data-driven platform that allows cancer researchers and bioinformaticians to search and download cancer data for analysis.

Prefix
gdc
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Genomic Data Commons Data Portal should match this regular expression:
^[a-z0-9]{8}-[a-z0-9]{4}-[a-z0-9]{4}-[a-z0-9]{4}-[a-z0-9]{12}$

Example Local Unique Identifier
ae8c77fe-e6c8-44d5-8265-4a38c637bbef   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Genomic Data Commons Data Portal should match this regular expression:
^gdc:[a-z0-9]{8}-[a-z0-9]{4}-[a-z0-9]{4}-[a-z0-9]{4}-[a-z0-9]{12}$

Example CURIE
gdc:ae8c77fe-e6c8-44d5-8265-4a38c637bbef
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for gdc.

Registry Name Metaprefix External Prefix
Identifiers.org miriam gdc
Name-to-Thing n2t gdc
Prefix Commons prefixcommons GDC
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE gdc:ae8c77fe-e6c8-44d5-8265-4a38c637bbef is used to demonstrate the provides available for gdc. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Genomic Data Commons Data Portal gdc https://portal.gdc.cancer.gov/cases/ae8c77fe-e6c8-44d5-8265-4a38c637bbef
Bioregistry bioregistry https://bioregistry.io/gdc:ae8c77fe-e6c8-44d5-8265-4a38c637bbef
Identifiers.org miriam https://identifiers.org/gdc:ae8c77fe-e6c8-44d5-8265-4a38c637bbef
Name-to-Thing n2t https://n2t.net/gdc:ae8c77fe-e6c8-44d5-8265-4a38c637bbef