GabiPD (Genome Analysis of Plant Biological Systems Primary Database) constitutes a repository for a wide array of heterogeneous data from high-throughput experiments in several plant species. These data (i.e. genomics, transcriptomics, proteomics and metabolomics), originating from different model or crop species, can be accessed through a central gene 'Green Card'.

Prefix
gabi
Keywords
gene genome plant
Links
Homepage
Publications
2008 GabiPD: the GABI primary database--a plant integrative 'omics' database
Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in GABI should match this regular expression:
^\w+$

Example Local Unique Identifier
2679240   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from GABI should match this regular expression:
^gabi:\w+$

Example CURIE
gabi:2679240
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 5 mappings to external registries with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext GABI
Identifiers.org Identifiers.org logo miriam gabi
N2T Name-to-Thing logo n2t gabi
NCBI National Center for Biotechnology Information Registry logo ncbi GABI
Prefix Commons Prefix Commons logo prefixcommons gabi
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 2679240 is used to demonstrate the providers available for GABI. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
GABI gabi http://www.gabipd.org/database/cgi-bin/GreenCards.pl.cgi?BioObjectId=2679240&Mode=ShowBioObject
Bioregistry bioregistry https://bioregistry.io/gabi:2679240
Identifiers.org miriam https://identifiers.org/gabi:2679240
Name-to-Thing n2t https://n2t.net/gabi:2679240
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
Bio2RDF bio2rdf http://bio2rdf.org/gabi:2679240