Computational gene function prediction can serve to focus experimental resources on high-priority experimental tasks. FuncBase is a web resource for viewing quantitative machine learning-based gene function annotations. Quantitative annotations of genes, including fungal and mammalian genes, with Gene Ontology terms are accompanied by a community feedback system. Evidence underlying function annotations is shown. FuncBase provides links to external resources, and may be accessed directly or via links from species-specific databases. This collection references yeast.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in FuncBase Yeast should match this regular expression:

Example Local Unique Identifier
2701   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from FuncBase Yeast should match this regular expression:

Example CURIE

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for funcbase.yeast.

Registry Name Metaprefix External Prefix logo miriam funcbase.yeast
Name-to-Thing Name-to-Thing logo n2t funcbase.yeast
Prefix Commons prefixcommons FUNCBASE.YEAST

Providers are various services that resolve CURIEs to URLs. The example CURIE funcbase.yeast:2701 is used to demonstrate the provides available for funcbase.yeast. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
FuncBase Yeast funcbase.yeast
Bioregistry bioregistry miriam
Name-to-Thing n2t