Computational gene function prediction can serve to focus experimental resources on high-priority experimental tasks. FuncBase is a web resource for viewing quantitative machine learning-based gene function annotations. Quantitative annotations of genes, including fungal and mammalian genes, with Gene Ontology terms are accompanied by a community feedback system. Evidence underlying function annotations is shown. FuncBase provides links to external resources, and may be accessed directly or via links from species-specific databases. This collection references human data.
funcbase.human
Local identifiers in FuncBase Human should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from FuncBase Human should match
this regular expression:
^funcbase\.human:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
FUNCBASE.HUMAN
|
|
Identifiers.org | miriam |
funcbase.human
|
|
N2T | n2t |
funcbase.human
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 119514
is used to demonstrate the providers
available for FuncBase Human. A guide for curating additional providers can be found
here.
Name | Metaprefix | URI |
---|---|---|
FuncBase Human | funcbase.human |
http://func.mshri.on.ca/human/genes/list_functional_scores/119514 |
Bioregistry | bioregistry |
https://bioregistry.io/funcbase.human:119514 |
Identifiers.org | miriam |
https://identifiers.org/funcbase.human:119514 |
Name-to-Thing | n2t |
https://n2t.net/funcbase.human:119514 |