Computational gene function prediction can serve to focus experimental resources on high-priority experimental tasks. FuncBase is a web resource for viewing quantitative machine learning-based gene function annotations. Quantitative annotations of genes, including fungal and mammalian genes, with Gene Ontology terms are accompanied by a community feedback system. Evidence underlying function annotations is shown. FuncBase provides links to external resources, and may be accessed directly or via links from species-specific databases. This collection references human data.

Prefix
funcbase.human
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in FuncBase Human should match this regular expression:
^\d+$

Example Local Unique Identifier
119514   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from FuncBase Human should match this regular expression:
^funcbase.human:\d+$

Example CURIE
funcbase.human:119514
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for funcbase.human.

Registry Name Metaprefix External Prefix
Identifiers.org miriam funcbase.human
Name-to-Thing n2t funcbase.human
Prefix Commons prefixcommons FUNCBASE.HUMAN
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE funcbase.human:119514 is used to demonstrate the provides available for funcbase.human. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
FuncBase Human funcbase.human http://func.mshri.on.ca/human/genes/list_functional_scores/119514
Bioregistry bioregistry https://bioregistry.io/funcbase.human:119514
Identifiers.org miriam https://identifiers.org/funcbase.human:119514
Name-to-Thing n2t https://n2t.net/funcbase.human:119514