Computational gene function prediction can serve to focus experimental resources on high-priority experimental tasks. FuncBase is a web resource for viewing quantitative machine learning-based gene function annotations. Quantitative annotations of genes, including fungal and mammalian genes, with Gene Ontology terms are accompanied by a community feedback system. Evidence underlying function annotations is shown. FuncBase provides links to external resources, and may be accessed directly or via links from species-specific databases. This collection references Drosophila data.
funcbase.fly
Local identifiers in FuncBase Fly should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from FuncBase Fly should match
this regular expression:
^funcbase\.fly:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for funcbase.fly
with
1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
FUNCBASE.FLY
|
|
Identifiers.org
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miriam |
funcbase.fly
|
|
Name-to-Thing
![]() |
n2t |
funcbase.fly
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
funcbase.fly:10194
is used to demonstrate the provides available for
funcbase.fly
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
FuncBase Fly | funcbase.fly |
http://func.mshri.on.ca/fly/genes/list_functional_scores/10194 |
Bioregistry | bioregistry |
https://bioregistry.io/funcbase.fly:10194 |
Identifiers.org | miriam |
https://identifiers.org/funcbase.fly:10194 |
Name-to-Thing | n2t |
https://n2t.net/funcbase.fly:10194 |