The Functional Single Nucleotide Polymorphism (F-SNP) database integrates information obtained from databases about the functional effects of SNPs. These effects are predicted and indicated at the splicing, transcriptional, translational and post-translational level. In particular, users can retrieve SNPs that disrupt genomic regions known to be functional, including splice sites and transcriptional regulatory regions. Users can also identify non-synonymous SNPs that may have deleterious effects on protein structure or function, interfere with protein translation or impede post-translational modification.
fsnp
Local identifiers in F-SNP should match this
regular expression:
^rs\d+$
Compact URIs (CURIEs) constructed from F-SNP should match
this regular expression:
^fsnp:rs\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
FSNP
|
|
Identifiers.org
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miriam |
fsnp
|
|
N2T
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n2t |
fsnp
|
|
Prefix Commons
|
prefixcommons |
fsnp
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
None:rs17852708
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/fsnp:rs17852708 |