The Foundational Model of Anatomy Ontology (FMA) is a biomedical informatics ontology. It is concerned with the representation of classes or types and relationships necessary for the symbolic representation of the phenotypic structure of the human body. Specifically, the FMA is a domain ontology that represents a coherent body of explicit declarative knowledge about human anatomy.
fma
FMA
Local identifiers in Foundational Model of Anatomy should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from Foundational Model of Anatomy should match
this regular expression:
^fma:\d+$
namespaceEmbeddedInLUI
as true.
This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known
as a banana)
and therefore look like a CURIE. For Foundational Model of Anatomy, the banana looks like
FMA:
.
Therefore, you may see local unique identifiers for this resource that look like
FMA:63189
(instead of the canonical form 63189
) and CURIEs for this resource that look like
fma:FMA:63189
(instead of the canonical form fma:63189
).
The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
The metaregistry provides mappings between the Bioregistry and other registries. There are
15 mappings to external registries for fma
with
6 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
AberOWL
![]() |
aberowl |
FMA
|
|
BARTOC
|
bartoc |
571
|
|
BioContext | biocontext |
FMA
|
|
BioPortal
![]() |
bioportal |
FMA
|
|
EDAM
|
edam |
1182
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.x56jsy
|
|
GO
![]() |
go |
FMA
|
|
HL7
![]() |
hl7 |
2.16.840.1.113883.6.119
|
|
Identifiers.org
![]() |
miriam |
fma
|
|
N2T
![]() |
n2t |
fma
|
|
OBO Foundry
![]() |
obofoundry |
fma
|
|
OLS
![]() |
ols |
fma
|
|
OntoBee
![]() |
ontobee |
FMA
|
|
Prefix Commons
|
prefixcommons |
fma
|
|
Wikidata
|
wikidata |
P1402
|
When using this resource in RDF, the following URI format should be used:
http://purl.obolibrary.org/obo/FMA_$1
Providers are various services that resolve CURIEs to URLs. The example CURIE
fma:63189
is used to demonstrate the provides available for
fma
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/fma:63189 |