Registry Drosophila development

An ontology of Drosophila melanogaster developmental stages.

Prefix: fbdv
Preferred Prefix: FBdv
Alternative Prefixes: FBdv
Keywords: development developmental biology fly life science obo ontology
Version: 2022-06-08
License: CC-BY-4.0
Links: Homepage Repository OBO OWL OBO JSON
Contact: Clare Pilgrim 0000-0002-1373-1705 Clare72
Pattern for Local Unique Identifiers: Local identifiers in Drosophila development should match this regular expression:
^\d{8}$
Example Local Unique Identifier: 00000000 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Drosophila development should match this regular expression:
^fbdv:\d{8}$
Example CURIE: fbdv:00000000

Metaregistry Drosophila development

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for fbdv with 3 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`FBDV`
BioContext	`biocontext`	`FBdv`
BioPortal	`bioportal`	`FB-DV`
FAIRSharing	`fairsharing`	`FAIRsharing.p52pzj`
OBO Foundry	`obofoundry`	`fbdv`
OLS	`ols`	`fbdv`
OntoBee	`ontobee`	`FBdv`
Prefix Commons	`prefixcommons`	`fbdv`

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE fbdv:00000000 is used to demonstrate the provides available for fbdv. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
Drosophila development	`fbdv`	http://purl.obolibrary.org/obo/FBdv_00000000
Bioregistry	`bioregistry`	https://bioregistry.io/fbdv:00000000
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/FBdv_00000000
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols/ontologies/fbdv/terms?iri=http://purl.obolibrary.org/obo/FBdv_00000000
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/FB-DV/?p=classes&conceptid=http://purl.obolibrary.org/obo/FBdv_00000000

Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code	Name	URL
`bio2rdf`	Bio2RDF	http://bio2rdf.org/fbdv:00000000

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("FBdv")
'fbdv'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("fbdv")
{'FBdv'}

Get the version:

>>> import bioregistry as br
>>> br.get_version("fbdv")
'2022-06-08'

Get the license:

>>> import bioregistry as br
>>> br.get_license("fbdv")
'CC-BY-4.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("fbdv")
'http://purl.obolibrary.org/obo/fbdv'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("fbdv")
'https://github.com/FlyBase/drosophila-developmental-ontology'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("fbdv")
'http://purl.obolibrary.org/obo/fbdv.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("fbdv")
'http://purl.obolibrary.org/obo/fbdv.owl'

Get the JSON download link:

>>> import bioregistry as br
>>> br.get_json_download("fbdv")
'http://purl.obolibrary.org/obo/fbdv.json'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("fbdv")
'Clare Pilgrim'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("fbdv")
'cp390@cam.ac.uk'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("fbdv")
'Clare72'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("fbdv")
'0000-0002-1373-1705'