Functional annotations of genomes for studying gene regulation, with a primary focus on cis-regulatory elements (CREs) such as promoters and enhancers.

Prefix

fanta

Links

Homepage Request Discussion

Contact

Takeya Kasukawa

Pattern for Local Unique Identifiers

Local identifiers in Functional Genome Annotations with Transcriptional Activities should match this regular expression:
^FC(HS|MM)_\d+$

Example Local Unique Identifier

FCHS_301358   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Functional Genome Annotations with Transcriptional Activities should match this regular expression:
^fanta:FC(HS|MM)_\d+$

Example CURIE

fanta:FCHS_301358

Publications

2024 Update of the FANTOM web resource: enhancement for studying noncoding genomes

Contributors

• submitter Mufaddal Naguthanawala   0009-0009-5240-7463   nagutm

Reviewer

Benjamin M. Gyori   0000-0001-9439-5346   bgyori

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier FCHS_301358 is used to demonstrate the providers available for Functional Genome Annotations with Transcriptional Activities. A guide for curating additional providers can be found here.