The Plant Environment Ontology is a set of standardized controlled vocabularies to describe various types of treatments given to an individual plant / a population or a cultured tissue and/or cell type sample to evaluate the response on its exposure. It also includes the study types, where the terms can be used to identify the growth study facility. Each growth facility such as field study, growth chamber, green house etc is a environment on its own it may also involve instances of biotic and abiotic environments as supplemental treatments used in these studies.

Prefix

eo

Preferred Prefix

EO

Links

Homepage Repository OBO OWL

Contact

Pankaj Jaiswal   0000-0002-1005-8383   jaiswalp

Pattern for Local Unique Identifiers

Local identifiers in Plant Environment Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier

0007404   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Plant Environment Ontology should match this regular expression:
^EO:\d{7}$

Example CURIE

EO:0007404

MIRIAM Namespace Embedded in LUI

The legacy MIRIAM standard for generating CURIEs with this resource includes the namespaceEmbeddedInLUI as true. The actual part that gets prefixed before the local unique identifier regex, otherwise known as the banana, is EO:. Therefore, you might see local unique identifiers written out as CURIEs.

References

• Publication Ontologies as integrative tools for plant science.

Appears In

FOODON

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for eo.

Providers are various services that resolve CURIEs to URLs. The example CURIE eo:0007404 is used to demonstrate the provides available for eo. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.