Registry Ensembl Protists
Ensembl Genomes consists of five sub-portals (for bacteria, protists, fungi, plants and invertebrate metazoa) designed to complement the availability of vertebrate genomes in Ensembl. This collection is concerned with protist genomes.
- Prefix
ensembl.protist- Keywords
- genome
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in Ensembl Protists should match this regular expression:
^\w+$ - Example Local Unique Identifier
- PF3D7_1328700 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Ensembl Protists should match this regular expression:
^ensembl\.protist:\w+$ - Example CURIE
- ensembl.protist:PF3D7_1328700
Metaregistry Ensembl Protists
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for ensembl.protist with
1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
ENSEMBL.PROTIST
|
|
Identifiers.org
|
miriam |
ensembl.protist
|
|
N2T
|
n2t |
ensembl.protist
|
|
Prefix Commons
|
prefixcommons |
ensembl.protist
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
ensembl.protist:PF3D7_1328700
is used to demonstrate the provides available for
ensembl.protist. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| Ensembl Protists | ensembl.protist |
https://protists.ensembl.org/id/PF3D7_1328700 |
| Bioregistry | bioregistry |
https://bioregistry.io/ensembl.protist:PF3D7_1328700 |
| Identifiers.org | miriam |
https://identifiers.org/ensembl.protist:PF3D7_1328700 |
| Name-to-Thing | n2t |
https://n2t.net/ensembl.protist:PF3D7_1328700 |
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/ensembl.protist:PF3D7_1328700 |