Ensembl Genomes consists of five sub-portals (for bacteria, protists, fungi, plants and invertebrate metazoa) designed to complement the availability of vertebrate genomes in Ensembl. This collection is concerned with plant genomes.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Ensembl Plants should match this regular expression:

Example Local Unique Identifier
AT1G73965   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Ensembl Plants should match this regular expression:

Example CURIE
Metaregistry Ensembl Plants

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext ENSEMBL.PLANT
Identifiers.org Identifiers.org logo miriam ensembl.plant
N2T Name-to-Thing logo n2t ensembl.plant
Prefix Commons Prefix Commons logo prefixcommons ensembl.plant

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier AT1G73965 is used to demonstrate the providers available for Ensembl Plants. A guide for curating additional providers can be found here.

Name Metaprefix URI
Ensembl Plants ensembl.plant https://plants.ensembl.org/id/AT1G73965
Bioregistry bioregistry https://bioregistry.io/ensembl.plant:AT1G73965
Identifiers.org miriam https://identifiers.org/ensembl.plant:AT1G73965
Name-to-Thing n2t https://n2t.net/ensembl.plant:AT1G73965
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/ensembl.plant:AT1G73965