The ENCODE Consortium is integrating multiple technologies and approaches in a collective effort to discover and define the functional elements encoded in the human genome, including genes, transcripts, and transcriptional regulatory regions, together with their attendant chromatin states and DNA methylation patterns.

epigenetics functional genomics
Idan Gabdank   0000-0001-5025-5886
Pattern for Local Unique Identifiers

Local identifiers in Encyclopedia of DNA Elements should match this regular expression:

Example Local Unique Identifier
ENCSR163RYW   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Encyclopedia of DNA Elements should match this regular expression:

Example CURIE
Metaregistry Encyclopedia of DNA Elements

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext ENCODE
Cellosaurus Cellosaurus Registry logo cellosaurus ENCODE
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.v0hbjs logo miriam encode
N2T Name-to-Thing logo n2t encode
re3data Registry of Research Data Repositories logo re3data r3d100013051

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier ENCSR163RYW is used to demonstrate the providers available for Encyclopedia of DNA Elements. A guide for curating additional providers can be found here.

Name Metaprefix URI
Encyclopedia of DNA Elements encode
Bioregistry bioregistry miriam
Name-to-Thing n2t