With the DataPLANT biology ontology (DPBO), DataPLANT provides an intermediate ontology that acts as a broker and bridge between the individual researcher/domain experts and main ontology providers. DPBO enables easy and agile collection of missing vocabulary as well as relationships between terms for (meta)data annotation using DataPLANT’s Swate tool.

Prefix

dpbo

Keywords

ontology

License

CC-BY-4.0

Links

Homepage Repository OBO Request Discussion

Contact

Kathryn Dumschott   0000-0002-9905-4011   kdumschott

Angela Kranz   0000-0002-8000-0400   AngelaKranz

Pattern for Local Unique Identifiers

Local identifiers in DataPLANT Biology Ontology should match this regular expression:
^\d+$

Example Local Unique Identifier

0010015   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from DataPLANT Biology Ontology should match this regular expression:
^dpbo:\d+$

Example CURIE

dpbo:0010015

Publications

2023 DataPLANT - Harnessing the Power of Ontologies for FAIR Research Data Management

Contributors

• submitter Hannah Dörpholz   0000-0002-0476-9699   Hannah-Doerpholz

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0010015 is used to demonstrate the providers available for DataPLANT Biology Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.