The database of Genotypes and Phenotypes (dbGaP) archives and distributes the results of studies that have investigated the interaction of genotype and phenotype.
- Prefix
dbgap- Keywords
- biomedical science epigenetics genetics
- Links
- Homepage
- Contact
- Michael Feolo 0000-0002-1650-5156 mfeolo
- Pattern for Local Unique Identifiers
-
Local identifiers in Database of Genotypes and Phenotypes should match this regular expression:
^phs[0-9]{6}(.v\d+.p\d+)?$ - Example Local Unique Identifier
- phs000768.v2.p1 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Database of Genotypes and Phenotypes should match this regular expression:
^dbgap:phs[0-9]{6}(.v\d+.p\d+)?$ - Example CURIE
- dbgap:phs000768.v2.p1
- Publications
Ontology
A summary of the relations in the Bioregistry schema can be found here.
- In Collection
- Synapse.org external links
Metaregistry Database of Genotypes and Phenotypes
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
DBGAP
|
|
Cellosaurus
|
cellosaurus |
dbGAP
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.88v2k0
|
|
Integbio
|
integbio |
nbdc00414
|
|
Identifiers.org
|
miriam |
dbgap
|
|
N2T
|
n2t |
dbgap
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier phs000768.v2.p1 is used to demonstrate the providers
available for Database of Genotypes and Phenotypes. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.