Registry Database of Genotypes and Phenotypes

The database of Genotypes and Phenotypes (dbGaP) archives and distributes the results of studies that have investigated the interaction of genotype and phenotype.

Prefix
dbgap
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Database of Genotypes and Phenotypes should match this regular expression:
^phs[0-9]{6}(.v\d+.p\d+)?$

Example Local Unique Identifier
phs000768.v2.p1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Database of Genotypes and Phenotypes should match this regular expression:
^dbgap:phs[0-9]{6}(.v\d+.p\d+)?$

Example CURIE
dbgap:phs000768.v2.p1
Metaregistry Database of Genotypes and Phenotypes

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for dbgap with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext DBGAP
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.88v2k0
Identifiers.org Identifiers.org logo miriam dbgap
Name-to-Thing Name-to-Thing logo n2t dbgap
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE dbgap:phs000768.v2.p1 is used to demonstrate the provides available for dbgap. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Database of Genotypes and Phenotypes dbgap https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000768.v2.p1
Bioregistry bioregistry https://bioregistry.io/dbgap:phs000768.v2.p1
Identifiers.org miriam https://identifiers.org/dbgap:phs000768.v2.p1
Name-to-Thing n2t https://n2t.net/dbgap:phs000768.v2.p1