Registry Database of small human noncoding RNAs

DASHR reports the annotation, expression and evidence for specific RNA processing (cleavage specificity scores/entropy) of human sncRNA genes, precursor and mature sncRNA products across different human tissues and cell types. DASHR integrates information from multiple existing annotation resources for small non-coding RNAs, including microRNAs (miRNAs), Piwi-interacting (piRNAs), small nuclear (snRNAs), nucleolar (snoRNAs), cytoplasmic (scRNAs), transfer (tRNAs), tRNA fragments (tRFs), and ribosomal RNAs (rRNAs). These datasets were obtained from non-diseased human tissues and cell types and were generated for studying or profiling small non-coding RNAs. This collection references RNA records.

Prefix
dashr
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Database of small human noncoding RNAs should match this regular expression:
^(hsa-(let|mir)-\w+(-\w+)?)|(piR-\d+)|(chr\w+.tRNA\d+-\w+)|(chr\w+.tRNA\d+-\w+-tRF\d)|((SNORD|SNORA|ACA|HBII|HBI|U)(-)?\w+)|(HY\d\+(-L\d+)?)|((LSU|SSU|5S)(-rRNA_Hsa)?(-L\d+)?)$

Example Local Unique Identifier
hsa-mir-200a   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Database of small human noncoding RNAs should match this regular expression:
^dashr:(hsa-(let|mir)-\w+(-\w+)?)|(piR-\d+)|(chr\w+.tRNA\d+-\w+)|(chr\w+.tRNA\d+-\w+-tRF\d)|((SNORD|SNORA|ACA|HBII|HBI|U)(-)?\w+)|(HY\d\+(-L\d+)?)|((LSU|SSU|5S)(-rRNA_Hsa)?(-L\d+)?)$

Example CURIE
dashr:hsa-mir-200a
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for dashr.

Registry Name Metaprefix External Prefix
Identifiers.org miriam dashr
Name-to-Thing n2t dashr
Prefix Commons prefixcommons DASHR
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE dashr:hsa-mir-200a is used to demonstrate the provides available for dashr. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Database of small human noncoding RNAs dashr http://lisanwanglab.org/DASHR/entry/hsa-mir-200a
Bioregistry bioregistry https://bioregistry.io/dashr:hsa-mir-200a
Identifiers.org miriam https://identifiers.org/dashr:hsa-mir-200a
Name-to-Thing n2t https://n2t.net/dashr:hsa-mir-200a