Registry Cryo Electron Microscopy ontology

Ontology that describes data types and image processing operations in Cryo Electron Microscopy of Single Particles

Prefix: cryoem
Keywords: electron microscopy ontology structural biology
Version: 2021-03-09
Links: Homepage OWL
Contact: Carlos Oscar S. Sorzano 0000-0002-9473-283X
Pattern for Local Unique Identifiers: Local identifiers in Cryo Electron Microscopy ontology should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0000052 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Cryo Electron Microscopy ontology should match this regular expression:
^cryoem:\d{7}$
Example CURIE: cryoem:0000052

Metaregistry Cryo Electron Microscopy ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`CRYOEM`
BioPortal	`bioportal`	`CRYOEM`
FAIRSharing	`fairsharing`	`FAIRsharing.q47I0t`
OLS	`ols`	`cryoem`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000052 is used to demonstrate the providers available for Cryo Electron Microscopy ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
Cryo Electron Microscopy ontology	`cryoem`	http://scipion.i2pc.es/ontology/CRYOEM_0000052
Bioregistry	`bioregistry`	https://bioregistry.io/cryoem:0000052

Get the version:

>>> import bioregistry as br
>>> br.get_version("cryoem")
'2021-03-09'

This name annotation was originally annotated in Ontology Lookup Service and is redistributed under the See https://github.com/biopragmatics/bioregistry/issues/340 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("cryoem")
'Cryo Electron Microscopy ontology'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("cryoem")
'http://scipion.i2pc.es/ontology/cryoem'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("cryoem")
'http://scipion.i2pc.es/ontology/cryoem/releases/2021-03-09/cryoem.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("cryoem")
'Carlos Oscar S. Sorzano'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("cryoem")
'isanchez@cnb.csic.es'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("cryoem")
'0000-0002-9473-283X'