The 'COmputational Modeling in BIology' NEtwork (COMBINE) is an initiative to coordinate the development of the various community standards and formats for computational models, initially in Systems Biology and related fields. This collection pertains to specifications of the standard formats developed by the Computational Modeling in Biology Network.

Prefix
combine.specifications
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in COMBINE specifications should match this regular expression:
^\w+(\-|\.|\w)*$

Example Local Unique Identifier
sbgn.er.level-1.version-1.2   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from COMBINE specifications should match this regular expression:
^combine.specifications:\w+(\-|\.|\w)*$

Example CURIE
combine.specifications:sbgn.er.level-1.version-1.2
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for combine.specifications.

Registry Name Metaprefix External Prefix
Identifiers.org miriam combine.specifications
Name-to-Thing n2t combine.specifications
Prefix Commons prefixcommons COMBINE.SPECIFICATIONS
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE combine.specifications:sbgn.er.level-1.version-1.2 is used to demonstrate the provides available for combine.specifications. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
COMBINE specifications combine.specifications https://co.mbine.org/specifications/sbgn.er.level-1.version-1.2
Bioregistry bioregistry https://bioregistry.io/combine.specifications:sbgn.er.level-1.version-1.2
Identifiers.org miriam https://identifiers.org/combine.specifications:sbgn.er.level-1.version-1.2
Name-to-Thing n2t https://n2t.net/combine.specifications:sbgn.er.level-1.version-1.2