The 'COmputational Modeling in BIology' NEtwork (COMBINE) is an initiative to coordinate the development of the various community standards and formats for computational models, initially in Systems Biology and related fields. This collection pertains to specifications of the standard formats developed by the Computational Modeling in Biology Network.

Prefix
combine.specifications
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in COMBINE specifications should match this regular expression:
^\w+(\-|\.|\w)*$

Example Local Unique Identifier
sed-ml.level-1.version-1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from COMBINE specifications should match this regular expression:
^combine\.specifications:\w+(\-|\.|\w)*$

Example CURIE
combine.specifications:sed-ml.level-1.version-1
Metaregistry COMBINE specifications

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext COMBINE.SPECIFICATIONS
Identifiers.org Identifiers.org logo miriam combine.specifications
N2T Name-to-Thing logo n2t combine.specifications
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier sed-ml.level-1.version-1 is used to demonstrate the providers available for COMBINE specifications. A guide for curating additional providers can be found here.

Name Metaprefix URI
COMBINE specifications combine.specifications https://github.com/combine-org/combine-specifications/blob/main/specifications/sed-ml.level-1.version-1.md
Bioregistry bioregistry https://bioregistry.io/combine.specifications:sed-ml.level-1.version-1
Identifiers.org miriam https://identifiers.org/combine.specifications:sed-ml.level-1.version-1
Name-to-Thing n2t https://n2t.net/combine.specifications:sed-ml.level-1.version-1