The 'COmputational Modeling in BIology' NEtwork (COMBINE) is an initiative to coordinate the development of the various community standards and formats for computational models, initially in Systems Biology and related fields. This collection pertains to specifications of the standard formats developed by the Computational Modeling in Biology Network.
- Prefix
combine.specifications- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in COMBINE specifications should match this regular expression:
^\w+(\-|\.|\w)*$ - Example Local Unique Identifier
- sed-ml.level-1.version-1 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from COMBINE specifications should match this regular expression:
^combine\.specifications:\w+(\-|\.|\w)*$ - Example CURIE
- combine.specifications:sed-ml.level-1.version-1
Metaregistry COMBINE specifications
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
COMBINE.SPECIFICATIONS
|
|
Identifiers.org
|
miriam |
combine.specifications
|
|
N2T
|
n2t |
combine.specifications
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier sed-ml.level-1.version-1 is used to demonstrate the providers
available for COMBINE specifications. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.