ClassyFire is a web-based application for automated structural classification of chemical entities. This application uses a rule-based approach that relies on a comprehensible, comprehensive, and computable chemical taxonomy. ClassyFire provides a hierarchical chemical classification of chemical entities (mostly small molecules and short peptide sequences), as well as a structure-based textual description, based on a chemical taxonomy named ChemOnt, which covers 4825 chemical classes of organic and inorganic compounds. Moreover, ClassyFire allows for text-based search via its web interface. It can be accessed via the web interface or via the ClassyFire API.
There's a mismatch between the MIRIAM URI format string, which has a C prefix in front of class identifiers and the ontology which does not use them.
Local identifiers in ClassyFire should match this
Compact URIs (CURIEs) constructed from ClassyFire should match
this regular expression:
The metaregistry provides mappings between the Bioregistry and other registries. There are
1 mappings to external registries for
1 unique external prefixes.
|Registry Name||Metaprefix||External Prefix|
Providers are various services that resolve CURIEs to URLs. The example CURIE
is used to demonstrate the provides available for
classyfire. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.