Variant Groups in CIViC provide user-defined grouping of Variants within and between genes based on unifying characteristics. CIViC curators are required to define a cohesive rationale for grouping these variants together, summarize their relevance to cancer diagnosis, prognosis or treatment and highlight any treatments or cancers of particular relevance
- Prefix
civic.vgid- Alternative Prefixes
- civic.variantgroup
- License
- CC0-1.0
- Links
- Homepage
- Contact
- Malachi Griffith 0000-0002-6388-446X malachig
- Pattern for Local Unique Identifiers
-
Local identifiers in CIViC Variant Group should match this regular expression:
^[0-9]+$ - Example Local Unique Identifier
- 16 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from CIViC Variant Group should match this regular expression:
^civic\.vgid:[0-9]+$ - Example CURIE
- civic.vgid:16
Metaregistry CIViC Variant Group
The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Identifiers.org
|
miriam |
civic.vgid
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 16 is used to demonstrate the providers
available for CIViC Variant Group. A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| CIViC Variant Group | civic.vgid |
https://civicdb.org/links/variant_group/16 |
| Bioregistry | bioregistry |
https://bioregistry.io/civic.vgid:16 |
| Identifiers.org | miriam |
https://identifiers.org/civic.vgid:16 |