Registry Coronavirus Infectious Disease Ontology

The Ontology of Coronavirus Infectious Disease (CIDO) is a community-driven open-source biomedical ontology in the area of coronavirus infectious disease. The CIDO is developed to provide standardized human- and computer-interpretable annotation and representation of various coronavirus infectious diseases, including their etiology, transmission, pathogenesis, diagnosis, prevention, and treatment.

Prefix
cido
Preferred Prefix
CIDO
Keywords
bioinformatics drug discovery drug repositioning epidemiology obo ontology virology
Version
1.0.337
License
CC-BY-4.0
Links
Homepage Repository OWL
Contact
Yongqun Oliver He   0000-0001-9189-9661   yongqunh
Pattern for Local Unique Identifiers

Local identifiers in Coronavirus Infectious Disease Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000005   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Coronavirus Infectious Disease Ontology should match this regular expression:
^cido:\d{7}$

Example CURIE
cido:0000005
Publications
Metaregistry Coronavirus Infectious Disease Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for cido with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL aberowl CIDO
BioPortal Prefixes bioportal CIDO
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.aVmpKl
OBO Foundry OBO Foundry logo obofoundry cido
Ontology Lookup Service Ontology Lookup Service logo ols cido
OntoBee ontobee CIDO
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE cido:0000005 is used to demonstrate the provides available for cido. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Bioregistry bioregistry https://bioregistry.io/cido:0000005
OBO Foundry obofoundry http://purl.obolibrary.org/obo/CIDO_0000005
Ontology Lookup Service ols https://www.ebi.ac.uk/ols/ontologies/cido/terms?iri=http://purl.obolibrary.org/obo/CIDO_0000005
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/CIDO/?p=classes&conceptid=http://purl.obolibrary.org/obo/CIDO_0000005