ChEMBL is a database of bioactive compounds, their quantitative properties and bioactivities (binding constants, pharmacology and ADMET, etc). The data is abstracted and curated from the primary scientific literature.
chembl.compound
Local identifiers in ChEMBL should match this
regular expression:
^CHEMBL\d+$
Compact URIs (CURIEs) constructed from ChEMBL should match
this regular expression:
^chembl\.compound:CHEMBL\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
CHEMBL.COMPOUND
|
|
EDAM | edam |
2646
|
|
Identifiers.org | miriam |
chembl.compound
|
|
N2T | n2t |
chembl.compound
|
|
TogoID | togoid |
ChemblCompound
|
|
Wikidata | wikidata |
P592
|
When using this resource in RDF, the following URI format should be used:
http://rdf.ebi.ac.uk/resource/chembl/molecule/$1
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier CHEMBL465070
is used to demonstrate the providers
available for ChEMBL. A guide for curating additional providers can be found
here.
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
CURATOR_REVIEW |
ChEMBL compound RDF | http://linkedchemistry.info/chembl/chemblid/CHEMBL465070 |
CURATOR_REVIEW |
ChEMBL compound RDF through EBI RDF Platform | https://rdf.ebi.ac.uk/resource/chembl/molecule/CHEMBL465070 |