The Cell Cycle Ontology is an application ontology that captures and integrates detailed knowledge on the cell cycle process.

Prefix
cco
Keywords
cell cycle functional genomics genomics life science obo ontology proteomics
Version
2016-03-23
Links
Homepage OBO OWL
Contact
Martin Kuiper   0000-0002-1171-9876   makuintnu
Pattern for Local Unique Identifiers

Local identifiers in Cell Cycle Ontology should match this regular expression:
^\w+$

Example Local Unique Identifier
0000003   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Cell Cycle Ontology should match this regular expression:
^cco:\w+$

Example CURIE
cco:0000003
MIRIAM Namespace Embedded in LUI
The legacy MIRIAM standard for generating CURIEs with this resource annotates the namespaceEmbeddedInLUI as true. This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known as a banana) and therefore look like a CURIE. For Cell Cycle Ontology, the banana looks like CCO:. Therefore, you may see local unique identifiers for this resource that look like CCO:0000003 (instead of the canonical form 0000003) and CURIEs for this resource that look like cco:CCO:0000003 (instead of the canonical form cco:0000003). The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
Publications
2009 The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process.
Metaregistry Cell Cycle Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for cco with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl CCO
BioContext biocontext CCO
BioPortal BioPortal Prefixes logo bioportal CCO
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.xhwrnr
Identifiers.org Identifiers.org logo miriam cco
N2T Name-to-Thing logo n2t cco
OLS Ontology Lookup Service logo ols cco
Prefix Commons Prefix Commons logo prefixcommons cco
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE cco:0000003 is used to demonstrate the provides available for cco. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Cell Cycle Ontology cco https://www.ebi.ac.uk/ols/ontologies/cco/terms?obo_id=CCO:0000003
Bioregistry bioregistry https://bioregistry.io/cco:0000003
Identifiers.org miriam https://identifiers.org/CCO:0000003
Name-to-Thing n2t https://n2t.net/cco:0000003
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/cco:0000003