BioTools is a registry of databases and software with tools, services, and workflows for biological and biomedical research.

bioinformatics biology biomedical science
Homepage Repository
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in BioTools should match this regular expression:

Example Local Unique Identifier
bioregistry   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BioTools should match this regular expression:

Example CURIE
2015 Tools and data services registry: a community effort to document bioinformatics resources.
Metaregistry BioTools

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for biotools with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext BIOTOOLS
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.63520c logo miriam biotools
Name-to-Thing Name-to-Thing logo n2t biotools
Registry of Research Data Repositories re3data r3d100013668

Providers are various services that resolve CURIEs to URLs. The example CURIE biotools:bioregistry is used to demonstrate the provides available for biotools. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
BioTools biotools
Bioregistry bioregistry miriam
Name-to-Thing n2t