BioSimulations is an open repository of simulation projects, including simulation experiments, their results, and data visualizations of their results. BioSimulations supports a broad range of model languages, modeling frameworks, simulation algorithms, and simulation software tools.

Prefix
biosimulations
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in biosimulations should match this regular expression:
^[a-zA-Z0-9_-]{3,}$

Example Local Unique Identifier
Yeast-cell-cycle-Irons-J-Theor-Biol-2009   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from biosimulations should match this regular expression:
^biosimulations:[a-zA-Z0-9_-]{3,}$

Example CURIE
biosimulations:Yeast-cell-cycle-Irons-J-Theor-Biol-2009
Metaregistry biosimulations

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for biosimulations with 2 unique external prefixes.

Registry Name Metaprefix External Prefix
Identifiers.org Identifiers.org logo miriam biosimulations
Registry of Research Data Repositories re3data r3d100013361
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE biosimulations:Yeast-cell-cycle-Irons-J-Theor-Biol-2009 is used to demonstrate the provides available for biosimulations. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
biosimulations biosimulations https://biosimulations.org/projects/Yeast-cell-cycle-Irons-J-Theor-Biol-2009
Bioregistry bioregistry https://bioregistry.io/biosimulations:Yeast-cell-cycle-Irons-J-Theor-Biol-2009
Identifiers.org miriam https://identifiers.org/biosimulations:Yeast-cell-cycle-Irons-J-Theor-Biol-2009