Registry BioProject
BioProject provides an organizational framework to access metadata about research projects and the data from the projects that are deposited into different databases. It provides information about a project’s scope, material, objectives, funding source and general relevance categories.
- Prefix
bioproject- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in BioProject should match this regular expression:
^PRJ[DEN][A-Z]\d+$ - Example Local Unique Identifier
- PRJDB3 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from BioProject should match this regular expression:
^bioproject:PRJ[DEN][A-Z]\d+$ - Example CURIE
- bioproject:PRJDB3
Metaregistry
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for bioproject.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
FAIRSharing
|
fairsharing |
FAIRsharing.aqhv1y
|
Identifiers.org
|
miriam |
bioproject
|
Name-to-Thing
|
n2t |
bioproject
|
| Prefix Commons | prefixcommons |
BIOPROJECT
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
bioproject:PRJDB3 is used to demonstrate the provides available for
bioproject. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| BioProject | bioproject |
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJDB3 |
| Bioregistry | bioregistry |
https://bioregistry.io/bioproject:PRJDB3 |
| Identifiers.org | miriam |
https://identifiers.org/bioproject:PRJDB3 |
| Name-to-Thing | n2t |
https://n2t.net/bioproject:PRJDB3 |
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
| ncbi | BioProject at NCBI | https://www.ncbi.nlm.nih.gov/bioproject?term=PRJDB3 |
| ebi | BioProject at European Nucleotide Archive (ENA) | https://www.ebi.ac.uk/ena/browser/view/PRJDB3 |