A high level datamodel of biological entities (genes, diseases, phenotypes, pathways, individuals, substances, etc) and their associations.

Prefix
biolink
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in BioLink Model should match this regular expression:
^\S+$

Example Local Unique Identifier
Gene   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BioLink Model should match this regular expression:
^biolink:\S+$

Example CURIE
biolink:Gene
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for biolink.

Registry Name Metaprefix External Prefix
Biolink Model Registry biolink biolink
Identifiers.org miriam biolink
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE biolink:Gene is used to demonstrate the provides available for biolink. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
BioLink Model biolink https://w3id.org/biolink/vocab/Gene
Bioregistry bioregistry https://bioregistry.io/biolink:Gene
Identifiers.org miriam https://identifiers.org/biolink:Gene