A high level datamodel of biological entities (genes, diseases, phenotypes, pathways, individuals, substances, etc) and their associations.
biolink
Local identifiers in Biolink Model should match this
regular expression:
^\S+$
Compact URIs (CURIEs) constructed from Biolink Model should match
this regular expression:
^biolink:\S+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
5 mappings to external registries for biolink
with
2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
AberOWL
![]() |
aberowl |
BIOLINK
|
|
Biolink
|
biolink |
biolink
|
|
BioPortal
![]() |
bioportal |
BIOLINK
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.ad9d85
|
|
Identifiers.org
![]() |
miriam |
biolink
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
biolink:Gene
is used to demonstrate the provides available for
biolink
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
Biolink Model | biolink |
https://w3id.org/biolink/vocab/Gene |
Bioregistry | bioregistry |
https://bioregistry.io/biolink:Gene |
Identifiers.org | miriam |
https://identifiers.org/biolink:Gene |