BioCompute is shorthand for the IEEE 2791-2020 standard for Bioinformatics Analyses Generated by High-Throughput Sequencing (HTS) to facilitate communication. This pipeline documentation approach has been adopted by a few FDA centers. The goal is to ease the communication burdens between research centers, organizations, and industries. This web portal allows users to build a BioCompute Objects through the interface in a human and machine readable format.

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Raja Mazumder   0000-0001-8823-9945
Pattern for Local Unique Identifiers

Local identifiers in Biocompute Object should match this regular expression:

Example Local Unique Identifier
000001   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Biocompute Object should match this regular expression:

Example CURIE
2017 BioCompute objects - a step towards evaluation and validation of bio-medical scientific computations

Providers are various services that resolve CURIEs to URLs. The example CURIE biocompute:000001 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Biocompute Object biocompute
Bioregistry bioregistry